| A | ||
| alignment | SPHARM alignment. | |
| B | ||
| batch | Command line and batch processing. | |
| D | ||
| display | Display results. | |
| E | ||
| expand-and-align | SPHARM-PDM expansion and alignment. | |
| expansion | SPHARM expansion. | |
| I | ||
| import | Import binary objects or surface meshes. | |
| P | ||
| parameterization | Spherical parameterization. | |
| S | ||
| statistical-analysis | Statistical shape analysis. | |
| T | ||
| team | Team and contact. | |
| tools | Directory and configuration tools. | |
| tutorial | Tutorial and processing pipeline. | |
| U | ||
| utilities | SPHARM-MAT utilities. |