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System Components and Features

SPHARM-MAT is a multifaceted computational analysis tool which allows for the in-depth application of SPHARM expansion techniques to accurately describe the morphometric features of the brain, its various components or other 3D structures. By using a graphical user interface, the toolkit is easy to utilize and allows for enhanced user control in order to specify settings appropriate for each unique study; see Tutorial and Processing Pipeline. Matlab command line scripts are also provided to help users write their own batch scripts; see Command Line and Batch Processing. This chapter organizes relevant information according to the functional components arranged on the GUI.


Relevant chapters

Relevant exercises

Relevant tips


  • CD - Change directory
  • PWD - Show current directory
  • Config - Define SPHARM-PDM path for PC and UNIX


  • Quit SPHARM-MAT.